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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133615607_133616828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133615607 - 133616828

Intron Length:

1222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTATATGATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTTATATGATT

Flanking Amino Acid:

TDFFIGDKYWRYDERSQSME

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

68.8

0.42

43.6

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

56.1

0.27

1.8

80.8

34.8

Associated Gene:

Gene:

MMP27

Ensembl Gene ID:

ENSAPLG00000005931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006134

133615176 - 133621984

6809