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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133620788_133621359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133620788 - 133621359

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTATTT

5'SS Class:

major

3'SS Sequence:

TTTGTAACTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TTTTTTGTAACT

Flanking Amino Acid:

PGWKKNKLTYRIMNYTPDMS

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

74.4

36.8

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

0.54

0.9

68.3

37.6

Minor 5ss

42.6

-0.8

3.4

64.9

46.4

Minor BPS

69.1

0.68

90.89

33.1

Associated Gene:

Gene:

MMP27

Ensembl Gene ID:

ENSAPLG00000005931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006134

133615176 - 133621984

6809