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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133633420_133634449_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133633420 - 133634449

Intron Length:

1030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTGGTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTTTTTGTATT

Flanking Amino Acid:

DEGQTINLVETYLQNFYNLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

0.72

78.4

31.2

Major PPT

75.4

0.57

73.3

41.6

Minor 5ss

-1

59.7

44.8

Minor BPS

56.3

0.28

1.7

79.72

Associated Gene:

Gene:

MMP1

Ensembl Gene ID:

ENSAPLG00000005987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006239

133627802 - 133634554

6753