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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133706046_133706876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133706046 - 133706876

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAGAG

5'SS Class:

major

3'SS Sequence:

TGGTTTGTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTCACTTTCATT

Flanking Amino Acid:

DDETWSDDSRGYNLFLVAAH

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.2

40.1

Major BPS

78.6

0.71

78.6

Major PPT

74.2

0.55

68.8

42.1

Minor 5ss

35.3

-1.7

3.4

46.6

48.7

Minor BPS

57.9

0.33

1.8

75.87

41.7

Associated Gene:

Gene:

MMP13

Ensembl Gene ID:

ENSAPLG00000007468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007802

133701285 - 133708742

7458