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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133707003_133707101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133707003 - 133707101

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACAG

5'SS Class:

major

3'SS Sequence:

TGTTGTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTGGTTTGAATG

Flanking Amino Acid:

ADIMISFGTKEHGDFYPFDG

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

62.5

43.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

81.7

0.71

0.8

76.5

37.7

Minor 5ss

36.9

-1.5

3.1

47.4

Minor BPS

49.5

-0.1

1.6

54.83

41.5

Associated Gene:

Gene:

MMP13

Ensembl Gene ID:

ENSAPLG00000007468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007802

133701285 - 133708742

7458