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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133780626_133782010_F


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
133780626 - 133782010

Intron Length:
1385

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAGTGC

5'SS Class:
major

3'SS Sequence:
TTTTGTCTTGAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TATTTTTTAAAT

Flanking Amino Acid:
VRGKEAERLPSTIKIDCLTV

Intron Amino Acid Position:
899

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.6
0.46
1.1
58.3
41.8

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
78.5
0.64
1
79.6
32.8

Minor 5ss
35.4
-1.7
3.5
50.3
46.3

Minor BPS
74.5
0.85
1.2
85.98
33.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

133766497 - 133789553
23057