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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133837467_133837878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133837467 - 133837878

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCATT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

ACTACATTAAAC

Flanking Amino Acid:

TTTGSGLRGQLLALTIQHEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

83.5

35.1

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

85.5

0.8

0.6

84.4

23.5

Minor 5ss

0.17

2.5

74.6

41.7

Minor BPS

54.7

0.13

1.8

64.48

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038702

133834807 - 133852453

17647