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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133837999_133839482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133837999 - 133839482

Intron Length:

1484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTGAC

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

LAKLEESLLETLATSQGNIL

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

48.9

-0

1.3

40.5

41.4

Major PPT

1.03

0.5

92.7

17.1

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038702

133834807 - 133852453

17647