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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133853943_133857056_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

133853943 - 133857056

Intron Length:

3114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATGAT

U12 Branch Point Sequence:

AATTCCCGATAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.8

38.5

Major BPS

72.1

0.55

1.1

44.2

Major PPT

89.9

0.9

0.7

88.4

28.7

Minor 5ss

35.6

-1.6

50.5

45.8

Minor BPS

44.2

-0.4

57.72

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025221

133850125 - 133927017

76893