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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133915602_133915943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133915602 - 133915943

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

ATGTCTCTAAGA

Flanking Amino Acid:

FLNALRQETARVMSCSVDSL

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.4

30.8

Major BPS

64.1

0.35

1.2

45.5

Major PPT

83.9

0.76

0.8

77.6

31.1

Minor 5ss

23.1

-3.1

3.2

Minor BPS

51.9

0.05

66.07

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025221

133850125 - 133927017

76893