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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13408323_13408434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13408323 - 13408434

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCGCGG

5'SS Class:

major

3'SS Sequence:

TCTCCTCGCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAA

U12 Branch Point Sequence:

TTGTTCTTCTCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.3

0.29

1.3

46.1

49.1

Major BPS

67.1

0.42

1.1

57.7

41.3

Major PPT

73.2

0.52

0.9

68.6

31.7

Minor 5ss

34.3

-1.8

3.5

47.2

48.2

Minor BPS

44.9

-0.3

3.6

78.93

43.7

Associated Gene:

Gene:

SRPK2

Ensembl Gene ID:

ENSAPLG00000004027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026997

13268767 - 13408616

139850

ENSAPLT00000023097

13268767 - 13408616

139850

ENSAPLT00000004167

13268767 - 13408616

139850

ENSAPLT00000047865

13268767 - 13408616

139850