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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134115489_134120732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134115489 - 134120732

Intron Length:

5244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTTTA

5'SS Class:

major

3'SS Sequence:

TCTTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TTTTTTCTACTT

Flanking Amino Acid:

SGKTVKKYHEGSEKQTLRRR

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

78.6

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

87.6

0.84

0.6

83.5

24.8

Minor 5ss

49.9

-0

2.4

67.2

43.9

Minor BPS

54.5

0.22

1.9

79.49

37.4

Associated Gene:

Gene:

PDGFD

Ensembl Gene ID:

ENSAPLG00000009485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034544

134115258 - 134251757

136500