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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134138085_134161667_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134138085 - 134161667

Intron Length:

23583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

TTAACGGTGATT

Flanking Amino Acid:

EADFANTQEMDDFQHAASET

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

82.9

0.74

0.6

82.3

22.3

Minor 5ss

41.2

-1

2.9

54.6

44.5

Minor BPS

43.7

-0.4

2.6

68.16

43.1

Associated Gene:

Gene:

PDGFD

Ensembl Gene ID:

ENSAPLG00000009485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017509

134116091 - 134250984

134894

ENSAPLT00000037512

134109528 - 134251762

142235

ENSAPLT00000035486

134109604 - 134251757

142154

ENSAPLT00000034544

134115258 - 134251757

136500

ENSAPLT00000027882

134109604 - 134275940

166337