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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134138085_134162372_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134138085 - 134162372

Intron Length:

24288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

TTAACGGTGATT

Flanking Amino Acid:

PGFKICYSLVDDFQHAASET

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

82.9

0.74

0.6

82.3

22.3

Minor 5ss

-1.6

47.1

42.6

Minor BPS

43.7

-0.4

2.6

68.16

43.1

Associated Gene:

Gene:

PDGFD

Ensembl Gene ID:

ENSAPLG00000009485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046947

134109604 - 134251757

142154

ENSAPLT00000009890

134120586 - 134213374

92789