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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134251014_134275715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134251014 - 134275715

Intron Length:

24702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

GGTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATAAAT

U12 Branch Point Sequence:

TAAATTGCGAGA

Flanking Amino Acid:

FSIQHRHFTEEPRSRAQRIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

56.8

0.17

1.2

65.3

38.6

Major PPT

83.2

0.75

0.9

77.1

37.1

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

34.2

-1.2

39.67

33.5

Associated Gene:

Gene:

PDGFD

Ensembl Gene ID:

ENSAPLG00000009485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027882

134109604 - 134275940

166337