Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_134336402_134363982_R

Intron Information:

Intron Rank:

139993

Intron Class:

major

Intron Phase:

Intron Coordinates:

134336402 - 134363982

Intron Length:

27581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TACCACATCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

91.4

0.93

0.6

87.5

22.7

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

44.8

-0.3

2.2

64.89

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032611

134335983 - 134364891

28909