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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13438886_13440888_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13438886 - 13440888

Intron Length:

2003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGCATTGGGACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TGCTCTTTACGC

Flanking Amino Acid:

YHAAGKKALAKVRTATDPRK

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

81.1

26.3

Major BPS

0.6

65.6

41.1

Major PPT

56.9

0.16

1.2

52.5

45.9

Minor 5ss

-1

2.9

52.8

38.5

Minor BPS

50.7

1.9

62.16

43.8

Associated Gene:

Gene:

PUS7

Ensembl Gene ID:

ENSAPLG00000005024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042522

13433520 - 13453498

19979