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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13458664_13459337_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13458664 - 13459337

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTGCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TAATTTACAATT

Flanking Amino Acid:

FQRWLTVEKKFALQKMDSML

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.5

37.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

77.4

0.62

0.9

76.4

37.6

Minor 5ss

40.3

-1.1

3.4

62.1

42.3

Minor BPS

48.2

-0

1.7

66.86

37.9

Associated Gene:

Gene:

RINT1

Ensembl Gene ID:

ENSAPLG00000005381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005582

13454520 - 13464312

9793