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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13462246_13462330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13462246 - 13462330

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAGAA

U12 Branch Point Sequence:

CTGGCCTAAACA

Flanking Amino Acid:

EKVDTFIYQEIIMANHFNEG

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

85.3

32.2

Major BPS

49.3

-0

0.9

44.7

28.3

Major PPT

82.3

0.73

0.9

76.3

37.7

Minor 5ss

38.9

-1.2

3.1

53.5

43.9

Minor BPS

57.7

0.24

1.9

66.48

46.2

Associated Gene:

Gene:

RINT1

Ensembl Gene ID:

ENSAPLG00000005381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005582

13454520 - 13464312

9793