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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13465370_13465641_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
13465370 - 13465641

Intron Length:
272

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCAGTCCA

5'SS Class:
major

3'SS Sequence:
TCCTTACCTTTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTATAT

U12 Branch Point Sequence:
GTTTCCTTACCT

Flanking Amino Acid:
GFLTPAQYREALKTLGLSTD

Intron Amino Acid Position:
96

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.4
0.69
1.3
71.6
40.2

Major BPS
79.2
0.73
1
75.3
39.4

Major PPT
76.6
0.6
0.8
74.4
29.6

Minor 5ss
29.9
-2.3
2.6
34.3
41

Minor BPS
79.3
1
1.5
92.9
35.6

Associated Gene:

Gene:
EFCAB10

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13465176 - 13466153
978