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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134779500_134780654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134779500 - 134780654

Intron Length:

1155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

MGAFPSSVQIGGLFIRNTDQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

GRIA4

Ensembl Gene ID:

ENSAPLG00000012015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027118

134779412 - 134997345

217934

ENSAPLT00000024069

134779412 - 134993498

214087

ENSAPLT00000012651

134779412 - 135002569

223158