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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134780814_134855980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134780814 - 134855980

Intron Length:

75167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

ACTAGGTGAACT

Flanking Amino Acid:

TANSFAVTNAFCSQYSRGVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

92.7

0.96

0.6

85.4

29.3

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

43.2

-0.4

2.4

63.81

46.1

Associated Gene:

Gene:

GRIA4

Ensembl Gene ID:

ENSAPLG00000012015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027118

134779412 - 134997345

217934

ENSAPLT00000024069

134779412 - 134993498

214087

ENSAPLT00000012651

134779412 - 135002569

223158