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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13483711_13486939_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13483711 - 13486939

Intron Length:

3229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGTGTCTAAATC

Flanking Amino Acid:

VEKHLNSQMWKKIPPAADSP

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

69.9

41.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

75.1

0.57

0.9

74.1

35.7

Minor 5ss

33.8

-1.8

3.2

40.5

39.9

Minor BPS

55.2

0.14

1.8

40.4

Associated Gene:

Gene:

ATXN7L1

Ensembl Gene ID:

ENSAPLG00000005905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006113

13475132 - 13586813

111682

ENSAPLT00000040031

13475132 - 13586813

111682

ENSAPLT00000028954

13475132 - 13586813

111682