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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13488446_13490871_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13488446 - 13490871

Intron Length:

2426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

GATGATGTAAAT

Flanking Amino Acid:

KSRPPNSVLPRPSSANSINS

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

78.6

0.64

0.8

70.3

36.4

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

42.6

-0.4

2.2

59.99

43.1

Associated Gene:

Gene:

ATXN7L1

Ensembl Gene ID:

ENSAPLG00000005905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006113

13475132 - 13586813

111682

ENSAPLT00000040031

13475132 - 13586813

111682

ENSAPLT00000028954

13475132 - 13586813

111682