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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134912786_134928976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134912786 - 134928976

Intron Length:

16191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACATTC

5'SS Class:

major

3'SS Sequence:

TTCTCTGCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTTTCTCT

Flanking Amino Acid:

IERLQNLLEQIVSVGKHVKG

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

75.9

34.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.9

0.72

0.8

76.8

31.9

Minor 5ss

-0.2

2.9

68.1

42.9

Minor BPS

47.9

-0

3.6

87.39

38.7

Associated Gene:

Gene:

GRIA4

Ensembl Gene ID:

ENSAPLG00000012015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027118

134779412 - 134997345

217934

ENSAPLT00000024069

134779412 - 134993498

214087

ENSAPLT00000012651

134779412 - 135002569

223158