Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_13491897_13491990_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13491897 - 13491990

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTTTC

5'SS Class:

major

3'SS Sequence:

TCCTGTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTCAT

U12 Branch Point Sequence:

CCTGTCTTACAG

Flanking Amino Acid:

KPCTRSLTCKTMGMVFRRCF

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

76.8

32.7

Major BPS

60.9

0.27

1.3

63.1

44.4

Major PPT

81.9

0.72

0.8

75.5

33.1

Minor 5ss

53.3

0.11

2.3

70.3

40.3

Minor BPS

45.6

-0.4

1.9

47.05

46.3

Associated Gene:

Gene:

ATXN7L1

Ensembl Gene ID:

ENSAPLG00000005905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040031

13475132 - 13586813

111682