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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134932627_134934185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134932627 - 134934185

Intron Length:

1559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTCAATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTTCTTCAATT

Flanking Amino Acid:

GIDMERTLKQVRIQGLTGNV

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.2

30.9

Major BPS

78.6

0.71

78.6

Major PPT

76.8

0.6

0.8

73.9

35.3

Minor 5ss

32.8

-2

3.7

46.2

49.1

Minor BPS

77.2

0.93

1.4

92.06

30.7

Associated Gene:

Gene:

GRIA4

Ensembl Gene ID:

ENSAPLG00000012015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012651

134779412 - 135002569

223158

ENSAPLT00000027118

134779412 - 134997345

217934

ENSAPLT00000024069

134779412 - 134993498

214087