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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134934291_134939279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134934291 - 134939279

Intron Length:

4989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTCATTTTATTT

Flanking Amino Acid:

FELKNTGPRKVGYWNDMDKL

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

92.9

0.96

0.7

88.5

28.1

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

54.9

0.23

1.6

71.35

40.7

Associated Gene:

Gene:

GRIA4

Ensembl Gene ID:

ENSAPLG00000012015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027118

134779412 - 134997345

217934

ENSAPLT00000024069

134779412 - 134993498

214087

ENSAPLT00000012651

134779412 - 135002569

223158