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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134956757_134961916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134956757 - 134961916

Intron Length:

5160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

TGATTTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGTTCTAACT

Flanking Amino Acid:

DSGSTKEFFRRSKIAVYEKM

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

68.7

39.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.7

0.71

0.9

73.8

41.5

Minor 5ss

40.8

-1

2.8

45.7

43.5

Minor BPS

62.7

0.48

1.8

83.74

37.5

Associated Gene:

Gene:

GRIA4

Ensembl Gene ID:

ENSAPLG00000012015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027118

134779412 - 134997345

217934

ENSAPLT00000024069

134779412 - 134993498

214087

ENSAPLT00000012651

134779412 - 135002569

223158