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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134993578_134995706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134993578 - 134995706

Intron Length:

2129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCGC

5'SS Class:

major

3'SS Sequence:

TCTGTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGGAT

U12 Branch Point Sequence:

TCAGGGTTAACT

Flanking Amino Acid:

ECGPKDSGSKDKTSALSLSN

Intron Amino Acid Position:

804

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.3

67.1

44.6

Major BPS

58.9

0.22

1.5

59.3

47.1

Major PPT

80.3

0.68

0.8

72.9

37.4

Minor 5ss

-2.3

2.7

36.6

40.2

Minor BPS

46.8

-0.1

2.5

68.01

48.6

Associated Gene:

Gene:

GRIA4

Ensembl Gene ID:

ENSAPLG00000012015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027118

134779412 - 134997345

217934

ENSAPLT00000012651

134779412 - 135002569

223158