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Intron Name: Anas_platyrhynchos_platyrhynchos_1_134995842_135002404_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134995842 - 135002404

Intron Length:

6563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCAAAG

5'SS Class:

major

3'SS Sequence:

TTTGGGGTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTGGGGTGACA

Flanking Amino Acid:

KSRAEAKRMKLTFSEAIRNK

Intron Amino Acid Position:

849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.2

58.6

42.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

62.9

0.29

1.2

56.8

47.6

Minor 5ss

31.5

-2.1

3.1

46.4

Minor BPS

39.6

-0.8

2.9

61.55

45.2

Associated Gene:

Gene:

GRIA4

Ensembl Gene ID:

ENSAPLG00000012015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012651

134779412 - 135002569

223158