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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135034864_135041030_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

135034864 - 135041030

Intron Length:

6167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

TATCTTTGAGAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

88.7

0.87

0.6

89.2

19.8

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

46.3

-0.2

1.7

64.73

39.2

Associated Gene:

Gene:

MSANTD4

Ensembl Gene ID:

ENSAPLG00000011957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012438

135031739 - 135041311

9573