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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13505385_13586101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13505385 - 13586101

Intron Length:

80717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTCCATTACA

Flanking Amino Acid:

SREVMRLNKEERRHGSMCKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

87.2

0.84

0.7

81.4

29.1

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

68.5

0.58

1.9

84.96

34.1

Associated Gene:

Gene:

ATXN7L1

Ensembl Gene ID:

ENSAPLG00000005905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028954

13475132 - 13586813

111682