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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1351160_1351573_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1351160 - 1351573

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAG

U12 Branch Point Sequence:

GCACGGATAACA

Flanking Amino Acid:

DGKRIVLLAEGRLLNLSCST

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

45.4

-0.2

1.5

55.1

40.4

Major PPT

87.9

0.85

0.6

81.4

30.6

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

38.4

-0.8

2.4

47.37

42.1

Associated Gene:

Gene:

AHCYL2

Ensembl Gene ID:

ENSAPLG00000015897

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016614

1350099 - 1362879

12781