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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1354735_1355253_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1354735 - 1355253

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTTAT

U12 Branch Point Sequence:

TCTCACTTATTG

Flanking Amino Acid:

KQVVVCGYGEVGKGCCAALK

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

71.3

0.53

61.3

Major PPT

66.9

0.38

0.7

57.1

27.1

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

49.5

-0.1

1.9

57.67

44.1

Associated Gene:

Gene:

AHCYL2

Ensembl Gene ID:

ENSAPLG00000015897

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016614

1350099 - 1362879

12781