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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13547385_13586101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13547385 - 13586101

Intron Length:

38717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

AACTTTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATATTTTTAACT

Flanking Amino Acid:

SREVMRLNKEDMHLFGHYPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

72.3

0.5

0.9

65.6

35.2

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

78.6

0.98

86.73

32.4

Associated Gene:

Gene:

ATXN7L1

Ensembl Gene ID:

ENSAPLG00000005905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040031

13475132 - 13586813

111682

ENSAPLT00000006113

13475132 - 13586813

111682