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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135496337_135497080_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135496337 - 135497080

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGACAT

U12 Branch Point Sequence:

TTTTTTTTGGCA

Flanking Amino Acid:

DDSVIESLVGKWGTWTKFQV

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

-0

1.2

56.4

39.5

Major PPT

89.2

0.88

0.8

88.3

28.9

Minor 5ss

37.8

-1.4

2.7

46.1

Minor BPS

47.6

-0.1

3.4

77.15

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036887

135494791 - 135507152

12362

ENSAPLT00000036741

135494791 - 135500194

5404

ENSAPLT00000033053

135494791 - 135507152

12362

ENSAPLT00000021151

135494791 - 135507152

12362