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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135497985_135500131_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

135497985 - 135500131

Intron Length:

2147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATGCATT

5'SS Class:

weak_major

3'SS Sequence:

GTCTGTCTATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

AGGGTATAAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.1

68.5

42.2

Major BPS

74.5

0.61

79.6

29.1

Major PPT

72.3

0.5

70.3

40.1

Minor 5ss

62.6

0.43

2.4

80.4

33.3

Minor BPS

43.3

-0.4

1.9

55.25

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036741

135494791 - 135500194

5404