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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135497985_135504861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135497985 - 135504861

Intron Length:

6877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTCTATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

AGGGTATAAATT

Flanking Amino Acid:

NVVALEAADEPSFNRCGVEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

74.5

0.61

79.6

29.1

Major PPT

72.3

0.5

70.3

40.1

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

43.3

-0.4

1.9

55.25

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036887

135494791 - 135507152

12362