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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1357813_1359395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1357813 - 1359395

Intron Length:

1583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAGCT

5'SS Class:

major

3'SS Sequence:

GCCTTCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

GGGGCGGTGACT

Flanking Amino Acid:

VNVEGWQPNMILDDGGDLTH

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

0.9

70.4

33.4

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

79.2

0.66

0.8

72.7

32.1

Minor 5ss

27.8

-2.6

3.3

36.6

41.5

Minor BPS

39.8

-0.7

2.6

56.03

46.4

Associated Gene:

Gene:

AHCYL2

Ensembl Gene ID:

ENSAPLG00000015897

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016614

1350099 - 1362879

12781