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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135826981_135835878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135826981 - 135835878

Intron Length:

8898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTTCACA

Flanking Amino Acid:

LWDTAGQERFRSITRSYYRN

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

91.6

0.94

0.6

87.6

22.6

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

75.4

0.79

1.7

86.69

32.1

Associated Gene:

Gene:

RAB39A

Ensembl Gene ID:

ENSAPLG00000015262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015903

135826148 - 135836305

10158