Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_135865285_135865872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135865285 - 135865872

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTATCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

CATCTCTTAATT

Flanking Amino Acid:

DPRFLTARDKAYKAVVNDAT

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

78.8

0.65

0.8

78.5

34.4

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

70.6

0.72

1.2

78.1

38.4

Associated Gene:

Gene:

CUL5

Ensembl Gene ID:

ENSAPLG00000015028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015708

135847622 - 135877758

30137

ENSAPLT00000015707

135847622 - 135873369

25748