Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_135869722_135870352_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135869722 - 135870352

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTGTTTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TTTGTTTGTACA

Flanking Amino Acid:

IEENMVEWLREVGMPADYVN

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

69.9

41.1

Major BPS

0.65

1.1

77.4

37.3

Major PPT

84.1

0.77

0.9

79.9

37.7

Minor 5ss

37.4

-1.4

2.7

42.4

38.3

Minor BPS

48.9

-0

1.9

66.93

39.6

Associated Gene:

Gene:

CUL5

Ensembl Gene ID:

ENSAPLG00000015028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015708

135847622 - 135877758

30137

ENSAPLT00000015707

135847622 - 135873369

25748