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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135903103_135903959_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135903103 - 135903959

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TCGCATTTAACA

Flanking Amino Acid:

PTPSKKKKIKKKKLPNSFPE

Intron Amino Acid Position:

1208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.7

1.15

0.7

86.9

30.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

82.1

0.72

0.7

76.1

26.2

Minor 5ss

25.7

-2.8

3.6

34.1

41.4

Minor BPS

59.6

0.3

1.5

65.47

Associated Gene:

Gene:

NPAT

Ensembl Gene ID:

ENSAPLG00000014400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015028

135903025 - 135923257

20233