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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135907252_135908607_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

135907252 - 135908607

Intron Length:

1356

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCCTAAATT

5'SS Class:

weak_major

3'SS Sequence:

TGATATTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AATACTTTGATA

Flanking Amino Acid:

LSVKNPLLMSSSAIIIASPV

Intron Amino Acid Position:

735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.8

0.02

1.3

62.1

42.1

Major BPS

84.4

0.85

34.5

Major PPT

76.2

0.59

0.9

73.9

41.1

Minor 5ss

31.7

-2.1

4.1

49.1

41.2

Minor BPS

61.9

0.37

1.2

65.86

Associated Gene:

Gene:

NPAT

Ensembl Gene ID:

ENSAPLG00000014400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015028

135903025 - 135923257

20233