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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135911159_135911922_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

135911159 - 135911922

Intron Length:

764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATGTTT

5'SS Class:

major

3'SS Sequence:

TAGACCAAGGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

AACCAGTGAACA

Flanking Amino Acid:

VHFKIFIFSVQADVLKTVTP

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

74.1

36.8

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

45.7

-0.2

1.2

39.5

Minor 5ss

42.9

-0.8

3.4

61.4

45.4

Minor BPS

41.9

-0.6

2.2

50.74

39.8

Associated Gene:

Gene:

NPAT

Ensembl Gene ID:

ENSAPLG00000014400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015028

135903025 - 135923257

20233