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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135915775_135917397_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

135915775 - 135917397

Intron Length:

1623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

CAGCACGTACTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTGTCTTTACTT

Flanking Amino Acid:

KKLDYTLSQIRSGIVEMKRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

49.8

-0

40.2

38.6

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

69.1

0.68

1.6

83.09

39.1

Associated Gene:

Gene:

NPAT

Ensembl Gene ID:

ENSAPLG00000014400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015028

135903025 - 135923257

20233