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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135920463_135923220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135920463 - 135923220

Intron Length:

2758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TGATTTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATC

Flanking Amino Acid:

LPSDVARLVLGYLQQEKLIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.7

0.65

73.1

41.9

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

77.2

0.83

79.83

28.4

Associated Gene:

Gene:

NPAT

Ensembl Gene ID:

ENSAPLG00000014400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015028

135903025 - 135923257

20233