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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135936946_135937282_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135936946 - 135937282

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTCT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AACAAAATAATT

Flanking Amino Acid:

ECVKLPPVLCSDFPHLMIQK

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

66.4

39.9

Major BPS

71.2

0.53

70.3

31.9

Major PPT

100

1.12

0.4

100

Minor 5ss

37.3

-1.4

3.6

56.2

48.2

Minor BPS

42.1

-0.5

1.9

56.03

39.4

Associated Gene:

Gene:

ATM

Ensembl Gene ID:

ENSAPLG00000012735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013383

135924607 - 135988698

64092