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Intron Name: Anas_platyrhynchos_platyrhynchos_1_135938605_135940385_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

135938605 - 135940385

Intron Length:

1781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

AATTTAGTCTAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTGTGTTTAATT

Flanking Amino Acid:

EKLLSSYAPELVAAEHLVRC

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

30.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

59.1

0.21

1.2

61.4

43.1

Minor 5ss

39.5

-1.2

2.8

48.7

47.5

Minor BPS

62.2

0.46

1.8

41.5

Associated Gene:

Gene:

ATM

Ensembl Gene ID:

ENSAPLG00000012735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013383

135924607 - 135988698

64092